Package: TcGSA
Type: Package
Title: Time-Course Gene Set Analysis
Version: 0.12.13
Date: 2025-07-22
Authors@R: c(person(c("Boris", "P"), "Hejblum", role = c("aut", "cre"),
		     email = "boris.hejblum@u-bordeaux.fr"), 
		     person("Damien", "Chimits", role = c("aut")), 
		     person("Anthony", "Devaux", role = c("aut"))
		    )
Depends: R (>= 3.0.2), ggplot2 (>= 2.0.0)
Imports: lme4 (>= 1.0-4), reshape2, GSA, multtest, cluster, cowplot,
        graphics, grDevices, gtools, stringr, splines, stats, utils
Suggests: BiocManager, foreach, parallel, doParallel, dearseq, knitr,
        GEOquery, rmarkdown
Description: Implementation of Time-course Gene Set Analysis (TcGSA), a
        method for analyzing longitudinal gene-expression data at the
        gene set level. Method is detailed in: Hejblum, Skinner &
        Thiebaut (2015) <doi: 10.1371/journal.pcbi.1004310>.
License: GPL-2 | file LICENSE
Encoding: UTF-8
BugReports: https://github.com/sistm/TcGSA/issues
RoxygenNote: 7.3.2
VignetteBuilder: knitr
URL: http://sistm.github.io/TcGSA/
Config/pak/sysreqs: cmake make libicu-dev
Repository: https://sistm.r-universe.dev
Date/Publication: 2025-07-26 23:41:58 UTC
RemoteUrl: https://github.com/sistm/tcgsa
RemoteRef: HEAD
RemoteSha: 0c8885d12127c1cd7c05affb43e820287d4dffad
NeedsCompilation: no
Packaged: 2026-06-22 08:06:26 UTC; root
Author: Boris P Hejblum [aut, cre],
  Damien Chimits [aut],
  Anthony Devaux [aut]
Maintainer: Boris P Hejblum <boris.hejblum@u-bordeaux.fr>