To cite CytOpT in publications please use: Freulon P, Bigot J, Hejblum BP (2020). CytOpT: Optimal Transport with Domain Adaptation for Interpreting Flow Cytometry data. arXiv 2006.09003. A BibTeX entry for LaTeX users is @Article{freulon2020cytopt, title = {CytOpT: Optimal Transport with Domain Adaptation for Interpreting Flow Cytometry data}, author = {{Freulon} and {Paul} and {Bigot} and {J'{e}r'{e}mie} and {Hejblum} and Boris P}, journal = {arXiv}, year = {2020}, pages = {2006.09003}, url = {https://arxiv.org/abs/2006.09003}, note = {R package version 0.9.4}, } We have invested a lot of time and effort in implementing CytOpT, please cite it when using it for data analysis or research.